Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm11531-201ENSMUST00000117614 555 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm13350-201ENSMUST00000120519 479 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm13570-201ENSMUST00000140763 309 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61a2Q9JLR1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Gm4034-201ENSMUST00000187674 480 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Gm3961-201ENSMUST00000204425 994 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Gm7783-201ENSMUST00000204795 781 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61a2Q9JLR1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms