Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm14127-201ENSMUST00000117906 678 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm14660-201ENSMUST00000119809 575 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm7029-201ENSMUST00000173226 450 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Mmp1bQ9EPL6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Snora78-201ENSMUST00000158630 128 ntBASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Gm25857-201ENSMUST00000082788 129 ntBASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Mmp1bQ9EPL6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Mmp1bQ9EPL6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Mmp1bQ9EPL6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Mmp1bQ9EPL6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.58□□□□□ -0.72
Mmp1bQ9EPL6 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.58□□□□□ -0.72
Mmp1bQ9EPL6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Mmp1bQ9EPL6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Mmp1bQ9EPL6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms