Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmgn3Q9DCB1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmgn3Q9DCB1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmgn3Q9DCB1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm11618-201ENSMUST00000117946 267 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm9083-201ENSMUST00000120423 819 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm15429-201ENSMUST00000151268 798 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm9136-201ENSMUST00000193368 454 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm37042-201ENSMUST00000193816 581 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm2423-201ENSMUST00000074863 733 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn3Q9DCB1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn3Q9DCB1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm11637-201ENSMUST00000120601 592 ntBASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm11964-201ENSMUST00000120982 444 ntBASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm17208-201ENSMUST00000168388 535 ntBASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Mir6392-201ENSMUST00000184924 108 ntBASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm18304-201ENSMUST00000189162 546 ntBASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm18473-201ENSMUST00000220543 868 ntBASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn3Q9DCB1 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms