Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm14130-201ENSMUST00000118417 987 ntBASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm18056-201ENSMUST00000207670 568 ntBASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm18061-201ENSMUST00000208350 562 ntBASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm18063-201ENSMUST00000208529 568 ntBASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm18052-201ENSMUST00000208750 559 ntBASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.56□□□□□ -0.4
Chmp2aQ9DB34 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Gm2383-201ENSMUST00000181461 807 ntBASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2aQ9DB34 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms