Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gm8062-201ENSMUST00000139696 444 ntBASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gm13570-201ENSMUST00000140763 309 ntBASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gm25857-201ENSMUST00000082788 129 ntBASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp4cQ9D7F7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Chmp4cQ9D7F7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Gm25043-201ENSMUST00000158604 212 ntBASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Gm38002-201ENSMUST00000193255 180 ntBASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Gm43433-201ENSMUST00000196573 481 ntBASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp4cQ9D7F7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Gm12957-201ENSMUST00000117835 377 ntBASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Mir7085-201ENSMUST00000184353 66 ntBASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Gm37424-201ENSMUST00000191727 561 ntBASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chmp4cQ9D7F7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms