Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Gm22144-201ENSMUST00000157402 102 ntBASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Stag1Q9D3E6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Stag1Q9D3E6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm13888-201ENSMUST00000119148 422 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm11956-201ENSMUST00000119525 512 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm14460-201ENSMUST00000121511 639 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm4726-201ENSMUST00000135604 736 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm7666-201ENSMUST00000146631 819 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm6019-201ENSMUST00000148369 736 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm27438-201ENSMUST00000183480 110 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm17831-201ENSMUST00000205579 900 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm9132-201ENSMUST00000210182 832 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm45398-201ENSMUST00000210561 165 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.33□□□□□ -0.12
Stag1Q9D3E6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms