Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx47Q9CWX9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx47Q9CWX9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ddx47Q9CWX9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.33□□□□□ -0.43
Ddx47Q9CWX9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ddx47Q9CWX9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ddx47Q9CWX9 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Ddx47Q9CWX9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx47Q9CWX9 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms