Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm15824-201ENSMUST00000119516 955 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm4986-201ENSMUST00000119731 549 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.13□□□□□ -0.15
Smc3Q9CW03 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm5370-201ENSMUST00000187187 574 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.13□□□□□ -0.15
Smc3Q9CW03 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc3Q9CW03 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm14247-201ENSMUST00000120950 237 ntBASIC14.12□□□□□ -0.15
Smc3Q9CW03 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.12□□□□□ -0.15
Smc3Q9CW03 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.12□□□□□ -0.15
Smc3Q9CW03 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.12□□□□□ -0.15
Smc3Q9CW03 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.12□□□□□ -0.15
Smc3Q9CW03 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc3Q9CW03 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm38158-201ENSMUST00000194617 339 ntBASIC14.11□□□□□ -0.15
Smc3Q9CW03 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms