Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm13392-201ENSMUST00000117708 150 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm15610-201ENSMUST00000120584 195 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm17931-201ENSMUST00000208132 634 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm10312-201ENSMUST00000078515 489 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.72□□□□□ -0.21
Trim11Q99PQ2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim11Q99PQ2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Gm15547-201ENSMUST00000122152 333 ntBASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Gm8712-201ENSMUST00000221090 701 ntBASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim11Q99PQ2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim11Q99PQ2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trim11Q99PQ2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim11Q99PQ2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim11Q99PQ2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim11Q99PQ2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim11Q99PQ2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim11Q99PQ2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gm12241-201ENSMUST00000118330 726 ntBASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gm27501-201ENSMUST00000183599 107 ntBASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Trim11Q99PQ2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms