Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm27320-201ENSMUST00000184892 109 ntBASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm20915-201ENSMUST00000191575 663 ntBASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm19088-201ENSMUST00000198800 566 ntBASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 AC120394.1-201ENSMUST00000217153 351 ntBASIC16.05■□□□□ 0.16
Rtn4Q99P72 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.05■□□□□ 0.16
Rtn4Q99P72 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Gm44086-201ENSMUST00000203251 2349 ntBASIC16.05■□□□□ 0.16
Rtn4Q99P72 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC16.05■□□□□ 0.16
Rtn4Q99P72 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4Q99P72 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gm15808-201ENSMUST00000119046 604 ntBASIC16.04■□□□□ 0.16
Rtn4Q99P72 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gm17376-201ENSMUST00000166016 84 ntBASIC16.04■□□□□ 0.16
Rtn4Q99P72 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gm37809-201ENSMUST00000195050 931 ntBASIC16.04■□□□□ 0.16
Rtn4Q99P72 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4Q99P72 Gm42683-201ENSMUST00000196136 2328 ntBASIC16.03■□□□□ 0.16
Rtn4Q99P72 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.03■□□□□ 0.16
Rtn4Q99P72 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Mir877-201ENSMUST00000104738 85 ntBASIC16.03■□□□□ 0.16
Rtn4Q99P72 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Rtn4Q99P72 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms