Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.52□□□□□ -0.4
Col25a1Q99MQ5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Gm25076-201ENSMUST00000104098 132 ntBASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Gm19587-201ENSMUST00000191395 545 ntBASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Gm45085-201ENSMUST00000209100 441 ntBASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col25a1Q99MQ5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm11957-201ENSMUST00000118304 779 ntBASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm13445-201ENSMUST00000121664 307 ntBASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col25a1Q99MQ5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm14193-201ENSMUST00000105067 153 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm12736-201ENSMUST00000119330 236 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm16459-201ENSMUST00000121443 686 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms