Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf111Q99ML9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm13342-201ENSMUST00000121055 207 ntBASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm27023-201ENSMUST00000182372 285 ntBASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm29396-201ENSMUST00000185659 716 ntBASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm6013-201ENSMUST00000212264 699 ntBASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm10608-202ENSMUST00000213924 676 ntBASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf111Q99ML9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm12314-201ENSMUST00000118104 538 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm4986-201ENSMUST00000119731 549 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm37201-201ENSMUST00000191845 523 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm42693-201ENSMUST00000196779 631 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm39404-201ENSMUST00000216350 313 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms