Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm6023-201ENSMUST00000118217 606 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm11424-201ENSMUST00000121929 829 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm9136-201ENSMUST00000193368 454 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap3Q99LM2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm10434-201ENSMUST00000101158 471 ntBASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm25043-201ENSMUST00000158604 212 ntBASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm2546-201ENSMUST00000182630 991 ntBASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm37008-201ENSMUST00000195712 319 ntBASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap3Q99LM2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cdk5rap3Q99LM2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms