Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Gm45113-201ENSMUST00000207518 165 ntBASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm12419-201ENSMUST00000116649 636 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm15610-201ENSMUST00000120584 195 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm8737-201ENSMUST00000122208 642 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm2875-201ENSMUST00000211333 360 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac2Q91Y09 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm3150-201ENSMUST00000166418 204 ntBASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm9630-201ENSMUST00000178304 885 ntBASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm44158-201ENSMUST00000203881 505 ntBASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Gm18636-201ENSMUST00000218846 1066 ntBASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhac2Q91Y09 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac2Q91Y09 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhac2Q91Y09 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.99□□□□□ -0.33
Pcdhac2Q91Y09 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac2Q91Y09 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms