Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm14723-201ENSMUST00000118686 215 ntBASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm14381-201ENSMUST00000122105 414 ntBASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm32999-201ENSMUST00000192693 562 ntBASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm43822-201ENSMUST00000200285 476 ntBASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb1Q91Y08 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Gm20482-202ENSMUST00000174729 825 ntBASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.49□□□□□ -0.41
Pcdhb1Q91Y08 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Gm11511-201ENSMUST00000118146 540 ntBASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 AA914427-201ENSMUST00000193194 1166 ntBASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Gm44651-201ENSMUST00000207343 372 ntBASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Gm13097-201ENSMUST00000210722 397 ntBASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb1Q91Y08 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms