Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm18041-201ENSMUST00000218210 618 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 AC154562.1-201ENSMUST00000226140 966 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Mir350-201ENSMUST00000083639 99 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb20Q91XZ9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44080-201ENSMUST00000204451 2214 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm11480-201ENSMUST00000120214 659 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm23773-201ENSMUST00000158985 296 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm8738-201ENSMUST00000172606 329 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm27501-201ENSMUST00000183599 107 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm8151-201ENSMUST00000184817 871 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm18303-201ENSMUST00000190055 1176 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm42599-201ENSMUST00000201308 469 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm7554-201ENSMUST00000202282 574 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm5904-201ENSMUST00000210286 865 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm4928-201ENSMUST00000219622 850 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms