Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 AC122539.3-201ENSMUST00000218355 1431 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb3Q91XZ7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm1866-201ENSMUST00000120701 477 ntBASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm37469-201ENSMUST00000193728 890 ntBASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm37517-201ENSMUST00000194004 1289 ntBASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb3Q91XZ7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm14938-201ENSMUST00000119482 943 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Snora78-201ENSMUST00000158630 128 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Mir1938-201ENSMUST00000158746 100 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm29127-201ENSMUST00000188304 517 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm42696-201ENSMUST00000199859 1142 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms