Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Gm15276-201ENSMUST00000145953 498 ntBASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm44651-201ENSMUST00000207343 372 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.35□□□□□ -0.43
Pcdhb6Q91XZ4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm9192-201ENSMUST00000183221 985 ntBASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms