Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp3Q91W36 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp3Q91W36 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp3Q91W36 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp3Q91W36 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.52□□□□□ -0.4
Usp3Q91W36 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.52□□□□□ -0.4
Usp3Q91W36 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp3Q91W36 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Usp3Q91W36 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm11233-201ENSMUST00000122357 634 ntBASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm6681-201ENSMUST00000205215 607 ntBASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.52□□□□□ -0.41
Usp3Q91W36 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.52□□□□□ -0.41
Usp3Q91W36 CT025538.2-201ENSMUST00000226083 772 ntBASIC12.52□□□□□ -0.41
Usp3Q91W36 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.52□□□□□ -0.41
Usp3Q91W36 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.52□□□□□ -0.41
Usp3Q91W36 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.52□□□□□ -0.41
Usp3Q91W36 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usp3Q91W36 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp3Q91W36 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Map1b-203ENSMUST00000223725 2669 ntBASIC12.51□□□□□ -0.41
Usp3Q91W36 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Gm22133-201ENSMUST00000102082 109 ntBASIC12.51□□□□□ -0.41
Usp3Q91W36 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Gm7857-201ENSMUST00000117957 358 ntBASIC12.51□□□□□ -0.41
Usp3Q91W36 Gm11511-201ENSMUST00000118146 540 ntBASIC12.51□□□□□ -0.41
Usp3Q91W36 Gm6461-201ENSMUST00000120015 633 ntBASIC12.51□□□□□ -0.41
Usp3Q91W36 Gm25843-201ENSMUST00000122582 314 ntBASIC12.51□□□□□ -0.41
Usp3Q91W36 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp3Q91W36 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp3Q91W36 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms