Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Gm26361-201ENSMUST00000158868 186 ntBASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Gm45574-201ENSMUST00000210921 331 ntBASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Gm5455-201ENSMUST00000058710 715 ntBASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb11Q91UZ8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb11Q91UZ8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb11Q91UZ8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm13996-201ENSMUST00000118456 430 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm38241-201ENSMUST00000192641 898 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm4857-201ENSMUST00000192718 785 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm18893-201ENSMUST00000198416 943 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm17931-201ENSMUST00000208132 634 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb11Q91UZ8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm12036-201ENSMUST00000120008 530 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm22885-201ENSMUST00000157410 107 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm43962-201ENSMUST00000203898 190 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm4607-201ENSMUST00000206649 577 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm8913-201ENSMUST00000209491 641 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm9257-201ENSMUST00000221254 232 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.32□□□□□ -0.44
Pcdhb11Q91UZ8 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms