Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm26956-201ENSMUST00000182176 986 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm18711-201ENSMUST00000199341 750 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Olfr284-202ENSMUST00000206647 966 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Gm9996-201ENSMUST00000070359 913 ntBASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.09□□□□□ -0.79
H1fooQ8VIK3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Gm25214-201ENSMUST00000104573 129 ntBASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Gm13297-201ENSMUST00000120205 934 ntBASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Mir7085-201ENSMUST00000184353 66 ntBASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Gm18935-201ENSMUST00000212692 664 ntBASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.08□□□□□ -0.8
H1fooQ8VIK3 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
H1fooQ8VIK3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H1fooQ8VIK3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms