Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm10774-201ENSMUST00000188689 204 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm37835-201ENSMUST00000193305 361 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm19287-201ENSMUST00000203190 358 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.9□□□□□ -0.34
TraipQ8VIG6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.9□□□□□ -0.34
TraipQ8VIG6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.9□□□□□ -0.34
TraipQ8VIG6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Gm13461-201ENSMUST00000120980 662 ntBASIC12.9□□□□□ -0.34
TraipQ8VIG6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Gm24514-201ENSMUST00000174961 285 ntBASIC12.9□□□□□ -0.34
TraipQ8VIG6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TraipQ8VIG6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TraipQ8VIG6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TraipQ8VIG6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.89□□□□□ -0.35
TraipQ8VIG6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gm5714-201ENSMUST00000197343 566 ntBASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.89□□□□□ -0.35
TraipQ8VIG6 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.89□□□□□ -0.35
TraipQ8VIG6 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.89□□□□□ -0.35
TraipQ8VIG6 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TraipQ8VIG6 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.89□□□□□ -0.35
TraipQ8VIG6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms