Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gm45433-201ENSMUST00000209386 247 ntBASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a1Q8K4Z5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Gm5616-201ENSMUST00000165252 384 ntBASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Gm8741-201ENSMUST00000174736 384 ntBASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Gm37666-201ENSMUST00000194110 866 ntBASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Gm18893-201ENSMUST00000198416 943 ntBASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3a1Q8K4Z5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm11511-201ENSMUST00000118146 540 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm2383-201ENSMUST00000181461 807 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm7003-201ENSMUST00000195089 312 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 AY036118-201ENSMUST00000200021 923 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm18056-201ENSMUST00000207670 568 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm18061-201ENSMUST00000208350 562 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm18063-201ENSMUST00000208529 568 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm18052-201ENSMUST00000208750 559 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Map1b-203ENSMUST00000223725 2669 ntBASIC14.71□□□□□ -0.05
Sf3a1Q8K4Z5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms