Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm24159-201ENSMUST00000175264 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm25299-201ENSMUST00000175283 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm23798-201ENSMUST00000175560 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm23802-201ENSMUST00000175565 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm25708-201ENSMUST00000177687 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm24370-201ENSMUST00000178007 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm23049-201ENSMUST00000178068 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm28019-201ENSMUST00000178138 101 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm25571-201ENSMUST00000178322 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm25355-201ENSMUST00000178456 101 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm24975-201ENSMUST00000178492 101 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm23189-201ENSMUST00000178954 102 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm25100-201ENSMUST00000179750 101 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm23064-201ENSMUST00000179866 101 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm11942-201ENSMUST00000180255 345 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm42655-201ENSMUST00000202782 1134 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm45481-201ENSMUST00000209717 877 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm39288-201ENSMUST00000210554 446 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx54Q8K4L0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Gm12663-201ENSMUST00000118481 958 ntBASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Gm26035-201ENSMUST00000083065 308 ntBASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx54Q8K4L0 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Mir744-201ENSMUST00000103261 100 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm11500-201ENSMUST00000118237 601 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm15610-201ENSMUST00000120584 195 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Mir6973a-201ENSMUST00000183646 78 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm43163-201ENSMUST00000196571 442 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm45085-201ENSMUST00000209100 441 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm5599-201ENSMUST00000209602 788 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 AC164618.2-201ENSMUST00000224770 573 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms