Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cchcr1Q8K2I2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm13297-201ENSMUST00000120205 934 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm26956-201ENSMUST00000182176 986 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm6013-201ENSMUST00000212264 699 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cchcr1Q8K2I2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Gm9136-201ENSMUST00000193368 454 ntBASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cchcr1Q8K2I2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cchcr1Q8K2I2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cchcr1Q8K2I2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.21□□□□□ -0.14
Cchcr1Q8K2I2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cchcr1Q8K2I2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms