Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Gm14058-201ENSMUST00000116082 735 ntBASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Gm13035-201ENSMUST00000117496 342 ntBASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbm28Q8CGC6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm13611-201ENSMUST00000118269 318 ntBASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Mir1943-201ENSMUST00000158276 73 ntBASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm9555-201ENSMUST00000200908 583 ntBASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm21811-201ENSMUST00000096485 930 ntBASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbm28Q8CGC6 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.21□□□□□ -0.14
Rbm28Q8CGC6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.21□□□□□ -0.14
Rbm28Q8CGC6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rbm28Q8CGC6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.21□□□□□ -0.14
Rbm28Q8CGC6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Gm12501-201ENSMUST00000119163 529 ntBASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Rprl1-201ENSMUST00000158050 327 ntBASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Gm43184-201ENSMUST00000197247 542 ntBASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Gm18711-201ENSMUST00000199341 750 ntBASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbm28Q8CGC6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms