Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm12490-201ENSMUST00000120255 560 ntBASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm24548-201ENSMUST00000158650 108 ntBASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm16379-201ENSMUST00000161469 348 ntBASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm6222-202ENSMUST00000182143 629 ntBASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Gm8762-201ENSMUST00000193486 339 ntBASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc28aQ8CEI3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc28aQ8CEI3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc28aQ8CEI3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms