Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm13315-201ENSMUST00000120376 991 ntBASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gm8018-201ENSMUST00000173536 789 ntBASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc28bQ8CEG5 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Gm12036-201ENSMUST00000120008 530 ntBASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Gm10012-201ENSMUST00000078252 192 ntBASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc28bQ8CEG5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc28bQ8CEG5 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc28bQ8CEG5 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc28bQ8CEG5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Ccdc28bQ8CEG5 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm44958-201ENSMUST00000203734 736 ntBASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc28bQ8CEG5 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms