Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vcpip1Q8CDG3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gm29396-201ENSMUST00000185659 716 ntBASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcpip1Q8CDG3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms