Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm13182-201ENSMUST00000122241 312 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm5706-201ENSMUST00000181525 993 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm42433-201ENSMUST00000196806 940 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm3726-201ENSMUST00000203110 785 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm18204-201ENSMUST00000209835 793 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Mt1-202ENSMUST00000211807 1085 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm9111-201ENSMUST00000219394 709 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm25201-201ENSMUST00000083093 170 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm14942-201ENSMUST00000119642 336 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm24248-201ENSMUST00000157321 322 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm22877-201ENSMUST00000175451 105 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm18463-201ENSMUST00000207258 474 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm18460-201ENSMUST00000208088 464 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.85□□□□□ -0.67
Col6a6Q8C6K9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm11354-201ENSMUST00000121974 422 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm4310-201ENSMUST00000177847 889 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm8956-201ENSMUST00000203939 825 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms