Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Mir1938-201ENSMUST00000158746 100 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm20482-202ENSMUST00000174729 825 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm32999-201ENSMUST00000192693 562 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm7783-201ENSMUST00000204795 781 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm4607-201ENSMUST00000206649 577 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trub1Q8C0D0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.4□□□□□ -0.43
Trub1Q8C0D0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trub1Q8C0D0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Gm14441-201ENSMUST00000121960 540 ntBASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trub1Q8C0D0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Gm38317-201ENSMUST00000195564 343 ntBASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Gm44651-201ENSMUST00000207343 372 ntBASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Gm13097-201ENSMUST00000210722 397 ntBASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Gm5455-201ENSMUST00000058710 715 ntBASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms