Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm13347-201ENSMUST00000120298 1353 ntBASIC16.91■□□□□ 0.3
Usp47Q8BY87 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp47Q8BY87 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.9■□□□□ 0.3
Usp47Q8BY87 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.9■□□□□ 0.3
Usp47Q8BY87 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm13611-201ENSMUST00000118269 318 ntBASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm15432-201ENSMUST00000121106 195 ntBASIC16.9■□□□□ 0.3
Usp47Q8BY87 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm45770-201ENSMUST00000212105 616 ntBASIC16.9■□□□□ 0.3
Usp47Q8BY87 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.9■□□□□ 0.3
Usp47Q8BY87 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp47Q8BY87 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.89■□□□□ 0.3
Usp47Q8BY87 Gm15566-201ENSMUST00000121130 590 ntBASIC16.89■□□□□ 0.3
Usp47Q8BY87 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.89■□□□□ 0.3
Usp47Q8BY87 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC16.89■□□□□ 0.3
Usp47Q8BY87 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.89■□□□□ 0.3
Usp47Q8BY87 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC16.89■□□□□ 0.3
Usp47Q8BY87 Gm42997-202ENSMUST00000200321 985 ntBASIC16.89■□□□□ 0.3
Usp47Q8BY87 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.89■□□□□ 0.3
Usp47Q8BY87 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Usp47Q8BY87 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp47Q8BY87 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Usp47Q8BY87 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.89■□□□□ 0.29
Usp47Q8BY87 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm22711-201ENSMUST00000116890 133 ntBASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm11960-201ENSMUST00000122068 925 ntBASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm24514-201ENSMUST00000174961 285 ntBASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm45118-201ENSMUST00000208928 825 ntBASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm7395-201ENSMUST00000216059 1045 ntBASIC16.89■□□□□ 0.29
Usp47Q8BY87 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp47Q8BY87 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Usp47Q8BY87 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Usp47Q8BY87 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms