Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm5053-201ENSMUST00000208361 1678 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm5778-201ENSMUST00000171003 1072 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm21092-201ENSMUST00000178995 955 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm12407-201ENSMUST00000180219 324 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm28937-201ENSMUST00000185413 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm29400-201ENSMUST00000187208 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm28662-201ENSMUST00000188446 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm28251-201ENSMUST00000188835 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm37318-201ENSMUST00000194325 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm38017-201ENSMUST00000194768 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm37287-201ENSMUST00000195449 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm37793-201ENSMUST00000195548 695 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm44506-201ENSMUST00000206278 965 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm7940-201ENSMUST00000218195 769 ntBASIC16.44■□□□□ 0.22
Usp40Q8BWR4 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp40Q8BWR4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Gm18198-201ENSMUST00000204986 1551 ntBASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Gm12036-201ENSMUST00000120008 530 ntBASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Mir7076-201ENSMUST00000183519 74 ntBASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 AC140293.1-201ENSMUST00000225626 1247 ntBASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Gm6430-201ENSMUST00000054664 1248 ntBASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp40Q8BWR4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm11892-201ENSMUST00000117711 1202 ntBASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm14441-201ENSMUST00000121960 540 ntBASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm8459-201ENSMUST00000162504 760 ntBASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm9645-201ENSMUST00000197131 792 ntBASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.42■□□□□ 0.22
Usp40Q8BWR4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms