Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm22133-201ENSMUST00000102082 109 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm14247-201ENSMUST00000120950 237 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm45186-201ENSMUST00000206874 478 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Aph1aQ8BVF7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Aph1aQ8BVF7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Aph1aQ8BVF7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms