Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Mir6956-201ENSMUST00000183598 62 ntBASIC9.89□□□□□ -0.83
Smco3Q8BQM7 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco3Q8BQM7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gm16215-201ENSMUST00000161990 637 ntBASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gm6218-201ENSMUST00000219812 628 ntBASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco3Q8BQM7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Gm15703-201ENSMUST00000120250 880 ntBASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Gm16479-201ENSMUST00000121706 932 ntBASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Gm13123-201ENSMUST00000122173 492 ntBASIC9.87□□□□□ -0.83
Smco3Q8BQM7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 192.5 ms