Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc40Q8BI79 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc40Q8BI79 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc40Q8BI79 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc40Q8BI79 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc40Q8BI79 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc40Q8BI79 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm13316-201ENSMUST00000140537 691 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm19309-201ENSMUST00000218295 205 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm8227-201ENSMUST00000223306 571 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc40Q8BI79 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Mospd4-201ENSMUST00000180618 576 ntBASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Gm42627-201ENSMUST00000197347 224 ntBASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc40Q8BI79 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gm14999-201ENSMUST00000121039 624 ntBASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms