Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm12138-201ENSMUST00000122180 951 ntBASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Gm23119-201ENSMUST00000158610 140 ntBASIC12.8□□□□□ -0.36
Trim6Q8BGE7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm45930-201ENSMUST00000221330 292 ntBASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm22058-201ENSMUST00000083393 310 ntBASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim6Q8BGE7 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm12502-201ENSMUST00000120197 444 ntBASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm44405-201ENSMUST00000198952 126 ntBASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm44958-201ENSMUST00000203734 736 ntBASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm45925-201ENSMUST00000218882 744 ntBASIC12.78□□□□□ -0.36
Trim6Q8BGE7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim6Q8BGE7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms