Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm17214-201ENSMUST00000164501 541 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm45856-201ENSMUST00000212752 416 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm28833-201ENSMUST00000189671 559 ntBASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm43380-201ENSMUST00000200421 220 ntBASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm7082-201ENSMUST00000209880 969 ntBASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm39288-201ENSMUST00000210554 446 ntBASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trnp1Q80ZI1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm25554-201ENSMUST00000158075 113 ntBASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm7741-201ENSMUST00000181445 989 ntBASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm9192-201ENSMUST00000183221 985 ntBASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gm43163-201ENSMUST00000196571 442 ntBASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trnp1Q80ZI1 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms