Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm7488-201ENSMUST00000117148 684 ntBASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm2495-201ENSMUST00000191160 466 ntBASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm2594-201ENSMUST00000214774 742 ntBASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf220Q6PDX6 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf220Q6PDX6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf220Q6PDX6 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Rnf220Q6PDX6 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Rnf220Q6PDX6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf220Q6PDX6 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Gm12859-201ENSMUST00000117834 427 ntBASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Gm27437-201ENSMUST00000183429 107 ntBASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Mir6392-201ENSMUST00000184924 108 ntBASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Rims2-204ENSMUST00000226410 3685 ntBASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.39□□□□□ -0.59
Rnf220Q6PDX6 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm12291-201ENSMUST00000121627 311 ntBASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms