Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Casc4Q6P2L7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm14644-201ENSMUST00000116671 647 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm25890-201ENSMUST00000177643 165 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm22614-201ENSMUST00000178300 165 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm9257-201ENSMUST00000221254 232 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm22042-201ENSMUST00000082989 165 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Gm26110-201ENSMUST00000083971 165 ntBASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Casc4Q6P2L7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Casc4Q6P2L7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Mir877-201ENSMUST00000104738 85 ntBASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.2□□□□□ -0.46
Casc4Q6P2L7 Gm38241-201ENSMUST00000192641 898 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms