Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm27046-201ENSMUST00000182160 463 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm3096-201ENSMUST00000185770 364 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm21769-201ENSMUST00000211922 111 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm10312-201ENSMUST00000078515 489 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ParpbpQ6IRT3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm24830-201ENSMUST00000102024 166 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm14726-201ENSMUST00000120623 896 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm9996-201ENSMUST00000070359 913 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm26232-201ENSMUST00000083360 166 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.32□□□□□ -0.6
ParpbpQ6IRT3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ParpbpQ6IRT3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.31□□□□□ -0.6
ParpbpQ6IRT3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ParpbpQ6IRT3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ParpbpQ6IRT3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms