Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.29□□□□□ -0.28
Krt39Q6IFX4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Gm14247-201ENSMUST00000120950 237 ntBASIC13.29□□□□□ -0.28
Krt39Q6IFX4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.29□□□□□ -0.28
Krt39Q6IFX4 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.29□□□□□ -0.28
Krt39Q6IFX4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt39Q6IFX4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Rprl1-201ENSMUST00000158050 327 ntBASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Gm42693-201ENSMUST00000196779 631 ntBASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt39Q6IFX4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt39Q6IFX4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms