Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm23931-201ENSMUST00000103842 109 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm6023-201ENSMUST00000118217 606 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm13460-201ENSMUST00000121274 353 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm12291-201ENSMUST00000121627 311 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.18□□□□□ -0.94
Foxc1Q61572 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm22121-201ENSMUST00000175148 54 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm26238-201ENSMUST00000175538 117 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm37396-201ENSMUST00000191827 1495 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm43133-201ENSMUST00000197472 463 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm43867-201ENSMUST00000203860 525 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Gm18935-201ENSMUST00000212692 664 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 AC162934.3-201ENSMUST00000223015 841 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Snora73a-201ENSMUST00000082453 205 ntBASIC9.18□□□□□ -0.94
Foxc1Q61572 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Foxc1Q61572 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Foxc1Q61572 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms