Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm16570-201ENSMUST00000161951 436 ntBASIC11.58□□□□□ -0.56
ClpbQ60649 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm4034-201ENSMUST00000187674 480 ntBASIC11.58□□□□□ -0.56
ClpbQ60649 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm8885-201ENSMUST00000189382 598 ntBASIC11.58□□□□□ -0.56
ClpbQ60649 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.58□□□□□ -0.56
ClpbQ60649 AA914427-201ENSMUST00000193194 1166 ntBASIC11.58□□□□□ -0.56
ClpbQ60649 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.58□□□□□ -0.56
ClpbQ60649 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.58□□□□□ -0.56
ClpbQ60649 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.58□□□□□ -0.56
ClpbQ60649 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.57□□□□□ -0.56
ClpbQ60649 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.57□□□□□ -0.56
ClpbQ60649 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm26361-201ENSMUST00000158868 186 ntBASIC11.57□□□□□ -0.56
ClpbQ60649 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.57□□□□□ -0.56
ClpbQ60649 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm2383-201ENSMUST00000181461 807 ntBASIC11.57□□□□□ -0.56
ClpbQ60649 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.57□□□□□ -0.56
ClpbQ60649 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm44958-201ENSMUST00000203734 736 ntBASIC11.57□□□□□ -0.56
ClpbQ60649 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.57□□□□□ -0.56
ClpbQ60649 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ClpbQ60649 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClpbQ60649 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
ClpbQ60649 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
ClpbQ60649 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
ClpbQ60649 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms