Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.04□□□□□ -0.16
Prdm1Q60636 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.04□□□□□ -0.16
Prdm1Q60636 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.03□□□□□ -0.16
Prdm1Q60636 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prdm1Q60636 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.03□□□□□ -0.16
Prdm1Q60636 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Gm15610-201ENSMUST00000120584 195 ntBASIC14.03□□□□□ -0.16
Prdm1Q60636 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.03□□□□□ -0.16
Prdm1Q60636 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prdm1Q60636 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.03□□□□□ -0.16
Prdm1Q60636 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Prdm1Q60636 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prdm1Q60636 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Prdm1Q60636 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.02□□□□□ -0.16
Prdm1Q60636 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prdm1Q60636 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prdm1Q60636 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prdm1Q60636 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Prdm1Q60636 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prdm1Q60636 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prdm1Q60636 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Gm11509-201ENSMUST00000117358 325 ntBASIC14.02□□□□□ -0.17
Prdm1Q60636 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Prdm1Q60636 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.02□□□□□ -0.17
Prdm1Q60636 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.02□□□□□ -0.17
Prdm1Q60636 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.02□□□□□ -0.17
Prdm1Q60636 Gm28450-201ENSMUST00000187349 638 ntBASIC14.02□□□□□ -0.17
Prdm1Q60636 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.02□□□□□ -0.17
Prdm1Q60636 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Prdm1Q60636 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Prdm1Q60636 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.02□□□□□ -0.17
Prdm1Q60636 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prdm1Q60636 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.01□□□□□ -0.17
Prdm1Q60636 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.01□□□□□ -0.17
Prdm1Q60636 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.01□□□□□ -0.17
Prdm1Q60636 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prdm1Q60636 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prdm1Q60636 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms