Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm17931-201ENSMUST00000208132 634 ntBASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Gm14644-201ENSMUST00000116671 647 ntBASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Gm12015-201ENSMUST00000117065 843 ntBASIC12.5□□□□□ -0.41
Trim38Q5SZ99 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.5□□□□□ -0.41
Trim38Q5SZ99 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim38Q5SZ99 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm23270-201ENSMUST00000104055 131 ntBASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm11930-201ENSMUST00000117788 190 ntBASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm19187-201ENSMUST00000206781 892 ntBASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm5186-201ENSMUST00000218781 920 ntBASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim38Q5SZ99 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms