Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Mir483-201ENSMUST00000093631 73 ntBASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc85aQ5SP85 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm14760-201ENSMUST00000121831 999 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm19891-201ENSMUST00000189771 303 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm3551-201ENSMUST00000190750 664 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm9139-201ENSMUST00000218817 700 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85aQ5SP85 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc85aQ5SP85 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc85aQ5SP85 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc85aQ5SP85 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc85aQ5SP85 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc85aQ5SP85 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gm16166-201ENSMUST00000118291 787 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gm14219-201ENSMUST00000120414 288 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gm21092-201ENSMUST00000178995 955 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gm8531-201ENSMUST00000188319 893 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gm9877-201ENSMUST00000064271 2627 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc85aQ5SP85 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms