Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm5070-201ENSMUST00000177599 862 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm3961-201ENSMUST00000204425 994 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm17931-201ENSMUST00000208132 634 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf20Q5DTM8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf20Q5DTM8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf20Q5DTM8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf20Q5DTM8 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Gm7722-201ENSMUST00000120646 741 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Gm8885-201ENSMUST00000189382 598 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf20Q5DTM8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm12164-201ENSMUST00000121695 551 ntBASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf20Q5DTM8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf20Q5DTM8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms