Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim80Q3V061 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim80Q3V061 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.48□□□□□ -0.41
Trim80Q3V061 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim80Q3V061 Gm12241-201ENSMUST00000118330 726 ntBASIC12.48□□□□□ -0.41
Trim80Q3V061 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim80Q3V061 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.48□□□□□ -0.41
Trim80Q3V061 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.48□□□□□ -0.41
Trim80Q3V061 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim80Q3V061 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim80Q3V061 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim80Q3V061 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim80Q3V061 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim80Q3V061 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim80Q3V061 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim80Q3V061 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm38341-201ENSMUST00000195357 515 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm43758-201ENSMUST00000199500 367 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Olfr284-202ENSMUST00000206647 966 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim80Q3V061 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trim80Q3V061 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim80Q3V061 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.47□□□□□ -0.41
Trim80Q3V061 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim80Q3V061 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim80Q3V061 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm11618-201ENSMUST00000117946 267 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm26083-201ENSMUST00000157904 193 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm44069-201ENSMUST00000204898 506 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm18056-201ENSMUST00000207670 568 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm18061-201ENSMUST00000208350 562 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm18063-201ENSMUST00000208529 568 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 Gm18052-201ENSMUST00000208750 559 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.46□□□□□ -0.41
Trim80Q3V061 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim80Q3V061 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms