Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm23251-201ENSMUST00000103773 110 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm7851-201ENSMUST00000117574 323 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm12501-201ENSMUST00000119163 529 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm15004-201ENSMUST00000119192 630 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rufy4Q3TYX8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gm12857-201ENSMUST00000117678 592 ntBASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gm13045-201ENSMUST00000119019 712 ntBASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gm5705-201ENSMUST00000066241 711 ntBASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rufy4Q3TYX8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rufy4Q3TYX8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms